Starting MySQL.. ERROR! The server quit without updating PID file (/var/lib/mysql/sunucu.indiriminvar.com.pid).

170415 15:33:28 mysqld_safe Starting mysqld daemon with databases from /var/lib/mysql
2017-04-15 15:33:28 0 [Warning] Using unique option prefix key_buffer instead of key_buffer_size is deprecated and will be removed in a future release. Please use the full name instead.
2017-04-15 15:33:28 0 [Warning] Using unique option prefix join_buffer instead of join_buffer_size is deprecated and will be removed in a future release. Please use the full name instead.
2017-04-15 15:33:28 0 [Warning] 'THREAD_CONCURRENCY' is deprecated and will be removed in a future release.
2017-04-15 15:33:28 0 [Warning] TIMESTAMP with implicit DEFAULT value is deprecated. Please use --explicit_defaults_for_timestamp server option (see documentation for more details).
2017-04-15 15:33:28 0 [Note] /usr/sbin/mysqld (mysqld 5.6.34) starting as process 5029 ...
2017-04-15 15:33:28 5029 [Warning] The option innodb (skip-innodb) is deprecated and will be removed in a future release
2017-04-15 15:33:28 5029 [Note] Plugin 'InnoDB' is disabled.
2017-04-15 15:33:28 5029 [Note] Plugin 'FEDERATED' is disabled.
/usr/sbin/mysqld: Table 'mysql.plugin' doesn't exist
2017-04-15 15:33:28 5029 [ERROR] Can't open the mysql.plugin table. Please run mysql_upgrade to create it.
2017-04-15 15:33:28 5029 [ERROR] /usr/sbin/mysqld: unknown option '--skip-locking'
2017-04-15 15:33:28 5029 [ERROR] Aborting

2017-04-15 15:33:28 5029 [Note] Binlog end
2017-04-15 15:33:28 5029 [Note] Shutting down plugin 'partition'
2017-04-15 15:33:28 5029 [Note] Shutting down plugin 'ARCHIVE'
2017-04-15 15:33:28 5029 [Note] Shutting down plugin 'BLACKHOLE'
2017-04-15 15:33:28 5029 [Note] Shutting down plugin 'INNODB_SYS_DATAFILES'
2017-04-15 15:33:28 5029 [Note] Shutting down plugin 'INNODB_SYS_TABLESPACES'
2017-04-15 15:33:28 5029 [Note] Shutting down plugin 'INNODB_SYS_FOREIGN_COLS'
2017-04-15 15:33:28 5029 [Note] Shutting down plugin 'INNODB_SYS_FOREIGN'
2017-04-15 15:33:28 5029 [Note] Shutting down plugin 'INNODB_SYS_FIELDS'
2017-04-15 15:33:28 5029 [Note] Shutting down plugin 'INNODB_SYS_COLUMNS'
2017-04-15 15:33:28 5029 [Note] Shutting down plugin 'INNODB_SYS_INDEXES'
2017-04-15 15:33:28 5029 [Note] Shutting down plugin 'INNODB_SYS_TABLESTATS'
2017-04-15 15:33:28 5029 [Note] Shutting down plugin 'INNODB_SYS_TABLES'
2017-04-15 15:33:28 5029 [Note] Shutting down plugin 'INNODB_FT_INDEX_TABLE'
2017-04-15 15:33:28 5029 [Note] Shutting down plugin 'INNODB_FT_INDEX_CACHE'
2017-04-15 15:33:28 5029 [Note] Shutting down plugin 'INNODB_FT_CONFIG'
2017-04-15 15:33:28 5029 [Note] Shutting down plugin 'INNODB_FT_BEING_DELETED'
2017-04-15 15:33:28 5029 [Note] Shutting down plugin 'INNODB_FT_DELETED'
2017-04-15 15:33:28 5029 [Note] Shutting down plugin 'INNODB_FT_DEFAULT_STOPWORD'
2017-04-15 15:33:28 5029 [Note] Shutting down plugin 'INNODB_METRICS'
2017-04-15 15:33:28 5029 [Note] Shutting down plugin 'INNODB_BUFFER_POOL_STATS'
2017-04-15 15:33:28 5029 [Note] Shutting down plugin 'INNODB_BUFFER_PAGE_LRU'
2017-04-15 15:33:28 5029 [Note] Shutting down plugin 'INNODB_BUFFER_PAGE'
2017-04-15 15:33:28 5029 [Note] Shutting down plugin 'INNODB_CMP_PER_INDEX_RESET'
2017-04-15 15:33:28 5029 [Note] Shutting down plugin 'INNODB_CMP_PER_INDEX'
2017-04-15 15:33:28 5029 [Note] Shutting down plugin 'INNODB_CMPMEM_RESET'
2017-04-15 15:33:28 5029 [Note] Shutting down plugin 'INNODB_CMPMEM'
2017-04-15 15:33:28 5029 [Note] Shutting down plugin 'INNODB_CMP_RESET'
2017-04-15 15:33:28 5029 [Note] Shutting down plugin 'INNODB_CMP'
2017-04-15 15:33:28 5029 [Note] Shutting down plugin 'INNODB_LOCK_WAITS'
2017-04-15 15:33:28 5029 [Note] Shutting down plugin 'INNODB_LOCKS'
2017-04-15 15:33:28 5029 [Note] Shutting down plugin 'INNODB_TRX'
2017-04-15 15:33:28 5029 [Note] Shutting down plugin 'PERFORMANCE_SCHEMA'
2017-04-15 15:33:28 5029 [Note] Shutting down plugin 'MRG_MYISAM'
2017-04-15 15:33:28 5029 [Note] Shutting down plugin 'MyISAM'
2017-04-15 15:33:28 5029 [Note] Shutting down plugin 'MEMORY'
2017-04-15 15:33:28 5029 [Note] Shutting down plugin 'CSV'
2017-04-15 15:33:28 5029 [Note] Shutting down plugin 'sha256_password'
2017-04-15 15:33:28 5029 [Note] Shutting down plugin 'mysql_old_password'
2017-04-15 15:33:28 5029 [Note] Shutting down plugin 'mysql_native_password'
2017-04-15 15:33:28 5029 [Note] Shutting down plugin 'binlog'
2017-04-15 15:33:28 5029 [Note] /usr/sbin/mysqld: Shutdown complete

170415 15:33:28 mysqld_safe mysqld from pid file /var/lib/mysql/sunucu.indiriminvar.com.pid ended